Package: symbolicDA 0.7-1

symbolicDA: Analysis of Symbolic Data

Symbolic data analysis methods: importing/exporting data from ASSO XML Files, distance calculation for symbolic data (Ichino-Yaguchi, de Carvalho measure), zoom star plot, 3d interval plot, multidimensional scaling for symbolic interval data, dynamic clustering based on distance matrix, HINoV method for symbolic data, Ichino's feature selection method, principal component analysis for symbolic interval data, decision trees for symbolic data based on optimal split with bagging, boosting and random forest approach (+visualization), kernel discriminant analysis for symbolic data, Kohonen's self-organizing maps for symbolic data, replication and profiling, artificial symbolic data generation. (Milligan, G.W., Cooper, M.C. (1985) <doi:10.1007/BF02294245>, Breiman, L. (1996), <doi:10.1007/BF00058655>, Hubert, L., Arabie, P. (1985), <doi:10.1007%2FBF01908075>, Ichino, M., & Yaguchi, H. (1994), <doi:10.1109/21.286391>, Rand, W.M. (1971) <doi:10.1080/01621459.1971.10482356>, Calinski, T., Harabasz, J. (1974) <doi:10.1080/03610927408827101>, Breckenridge, J.N. (2000) <doi:10.1207/S15327906MBR3502_5>, Groenen, P.J.F, Winsberg, S., Rodriguez, O., Diday, E. (2006) <doi:10.1016/j.csda.2006.04.003>, Walesiak, M., Dudek, A. (2008) <doi:10.1007/978-3-540-78246-9_11>, Dudek, A. (2007), <doi:10.1007/978-3-540-70981-7_4>).

Authors:Andrzej Dudek, Marcin Pelka <[email protected]>, Justyna Wilk<[email protected]>, Marek Walesiak <[email protected]>

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symbolicDA.pdf |symbolicDA.html
symbolicDA/json (API)

# Install 'symbolicDA' in R:
install.packages('symbolicDA', repos = c('https://a-dudek-ue.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • cars - Real data set in symbolic form - selected car models described by a set of symbolic variables
  • data_symbolic - Symbolic interval data

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

61 exports 0.71 score 156 dependencies 1 dependents 1 mentions 40 scripts 287 downloads

Last updated 2 years agofrom:7047352084. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 09 2024
R-4.5-winOKSep 09 2024
R-4.5-linuxOKSep 09 2024
R-4.4-winOKSep 09 2024
R-4.4-macOKSep 09 2024
R-4.3-winOKSep 09 2024
R-4.3-macOKSep 09 2024

Exports:.C1alpha.C1beta.C1gamma.centerF.clust.data2dist.dpmax.dpobject.dpprod.dpsum.gabs.gdomainLength.gprod.gsum.inn.is.symbolic.los.medoid2.nodeNumber.nomValues.p.parseFormula.PCA.classic.plot.decisionTree.SDA.pp.probDist.SDist.summary.symbolic.tickCoord.zoomStarbagging.SDAboosting.SDAcluster.Description.SDADClustdecisionTree.SDAdist_SDAdraw.decisionTree.SDAgenerate.SOHINoV.SDAIchinoFS.SDAindex.G1dinterscal.SDAiscal.SDAkernel.SDAkohonen.SDAparse.SOPCA.centers.SDAPCA.mrpca.SDAPCA.spaghetti.SDAPCA.spca.SDAPCA.vertices.SDArandom.forest.SDAreplication.SDARSDA2SymbolicDAsave.SOSClustsimple2SOSO2Simplesubsdt.SDAsymscal.SDAzoomStar

Dependencies:abindade4askpassbackportsbase64encbitbit64blobbootbroombslibcachemcarcarDatachronclasscliclusterclusterSimcodetoolscolorspacecowplotcpp11crosstalkcurldata.tableDBIDerivdigestdoBydplyrDTe1071ellipseemmeansestimabilityevaluateFactoMineRfansifarverfastmapflashClustfontawesomeforcatsforeachfsgbmgenericsggplot2ggpolypathggrepelglmnetgluegsubfngtableherehighrhtmltoolshtmlwidgetshttpuvhttrigraphisobanditeratorsjquerylibjsonlitekknnknitrlabelinglaterlatticelazyevalleapslifecyclelme4magrittrMASSMatrixMatrixModelsmemoisemgcvmicrobenchmarkmimeminpack.lmminqamodelrmultcompViewmunsellmvtnormneuralnetnlmenloptrnnetnumDerivopensslpbkrtestpillarpixmappkgconfigplogrplotlyplyrpngprincurvepromisesprotoproxypurrrquantregR6randomcoloRrandomForestrappdirsRColorBrewerRcppRcppArmadilloRcppEigenRcppTOMLreshapereticulaterglRJSONIOrlangrmarkdownrpartrprojrootRSDARSpectraRSQLiteRtsnesassscalesscatterplot3dshapeshapesspSparseMsqldfstringistringrsurvivalsystibbletidyrtidyselecttinytexumaputf8V8vctrsviridisLitewithrxfunXMLxtableyaml

Readme and manuals

Help Manual

Help pageTopics
Bagging algorithm for optimal split based on decision tree for symbolic objectsbagging.SDA
Boosting algorithm for optimal split based decision tree for symbolic objectsboosting.SDA
real data set in symbolic form - selected car models described by a set of symbolic variablescars
description of clusters of symbolic objectscluster.Description.SDA
Symbolic interval datadata_symbolic
Dynamical clustering based on distance matrixDClust
Decison tree for symbolic datadecisionTree.SDA
distance measurement for symbolic datadist_SDA
Draws optimal split based decision tree for symbolic objectsdraw.decisionTree.SDA
generation of artifficial symbolic data table with given cluster structuregenerate.SO
Modification of HINoV method for symbolic dataHINoV.SDA
Ichino's feature selection method for symbolic dataIchinoFS.SDA
Calinski-Harabasz pseudo F-statistic based on distance matrixindex.G1d
Multidimensional scaling for symbolic interval data - InterScal algorithminterscal.SDA
Multidimensional scaling for symbolic interval data - IScal algorithmiscal.SDA
Kernel discriminant analysis for symbolic datakernel.SDA
Kohonen's self-organizing maps for symbolic interval-valued datakohonen.SDA
Reading symbolic data table from ASSO-format XML fileparse.SO
principal component analysis for symbolic objects described by symbolic interavl variables. _Centers_ algorithmPCA.centers.SDA
principal component analysis for symbolic objects described by symbolic interavl variables. _Midpoints and radii_ algorithmPCA.mrpca.SDA
principal component analysis for symbolic objects described by symbolic interavl variables. _Spaghetti_ algorithmPCA.spaghetti.SDA
principal component analysis for symbolic objects described by symbolic interavl variables. _'Symbolic' PCA_ algorithmPCA.spca.SDA
principal component analysis for symbolic objects described by symbolic interavl variables. _Vertices_ algorithmPCA.vertices.SDA
Random forest algorithm for optimal split based decision tree for symbolic objectsrandom.forest.SDA
Modification of replication analysis for cluster validation of symbolic datareplication.SDA
Read a Symbolic Table fromRSDA2SymbolicDA
saves symbolic data table of 'symbolic' class to xml filesave.SO
Dynamical clustering of symbolic dataSClust
Change of representation of symbolic data from simple form to symbolic data tablesimple2SO
Change of representation of symbolic data from symbolic data table to simple formSO2Simple
Subset of symbolic data tablesubsdt.SDA
Symbolic data table Objectsymbolic.object
Multidimensional scaling for symbolic interval data - SymScal algorithmsymscal.SDA
zoom star chart for symbolic datazoomStar